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Mol Cancer Ther. 2006;5:97-103
© 2006 American Association for Cancer Research

New enzyme for reductive cancer chemotherapy, YieF, and its improvement by directed evolution

Yoram Barak1, Stephen H. Thorne1,2, David F. Ackerley1, Susan V. Lynch1, Christopher H. Contag1,2 and A. Matin1

Departments of 1 Microbiology and Immunology and 2 Pediatrics and Molecular Imaging Program, Stanford University School of Medicine, Stanford, California

Requests for reprints: A. Matin, Department of Microbiology and Immunology, Stanford University School of Medicine, Sherman Fairchild Science Building, 299 Campus Drive, Stanford, CA 94305. Phone: 650-725-4745; Fax: 650-725-6757. E-mail: a.matin{at}stanford.edu

Reductive prodrugs, mitomycin C and 5-aziridinyl-2,4-dinitrobenzamide (CB 1954), are nontoxic in their native form but become highly toxic upon reduction. Their effectiveness in cancer chemotherapy can be enhanced by delivering to tumors enzymes with improved prodrug reduction kinetics. We report the discovery of a new prodrug-reducing enzyme, YieF, from Escherichia coli, and the improvement of its kinetics for reducing mitomycin C and CB 1954. A YieF-derived enzyme, Y6, killed HeLa spinner cells with ≥5-fold efficiency than the wild-type enzymes, YieF and NfsA, at a variety of drug and enzyme concentrations and incubation times. With adhered HeLa cells and Salmonella typhimurium SL 7838 bacteria as enzyme delivery vehicle, at least an order of magnitude less of Y6-producing bacteria were required to kill >90% of tumor cells compared with bacteria expressing the wild-type enzymes, which at a comparable level killed <5% of the cells. Thus, Y6 is a promising enzyme for use in cancer chemotherapy, and Salmonella strain SL 7838, which specifically targets tumors, may be used to deliver the prodrug-activating enzymes to tumors. [Mol Cancer Ther 2006;5(1):97–103]


Grant support: Grants DE-FG03-97ER-624940 and DE-FG02-96ER20228 from the Natural and Accelerated Bioremediation Program of the U.S. Department of Energy; Small Animal Imaging Research Program (R24) grant CA 92862; Lady Davis postdoctoral fellowship (Y. Barak); STAX0101 fellowship from Foundation for Research, Science, and Technology New Zealand (D.F. Ackerley); and Stanford Medical School Dean's Fellowship (S.V. Lynch).

The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

3 Y. Barak, D.F. Ackerley, B. Lal, A. Matin, unpublished data.

4 S.H. Thorne, J. Hardy, B. Stoker, C.H. Contag, D.H. Kirn, unpublished data.

5 http://www.ncbi.nlm.nih.gov/sutils/genom_table.cgi.

6 http://searchlauncher.bcm.tmc.edu/multi-align/multi-align.html.

7 Y. Barak, Y. Nov, A. Matin, unpublished data.

8 Y. Barak, S. Jaiswal, J. Rao, A. Matin, unpublished data.

Received 9/12/05; revised 10/13/05; accepted 10/25/05.




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Appl. Environ. Microbiol.Home page
Y. Barak, D. F. Ackerley, C. J. Dodge, L. Banwari, C. Alex, A. J. Francis, and A. Matin
Analysis of novel soluble chromate and uranyl reductases and generation of an improved enzyme by directed evolution.
Appl. Envir. Microbiol., November 1, 2006; 72(11): 7074 - 7082.
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Copyright © 2006 by the American Association for Cancer Research.