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Mol Cancer Ther. 2004;3:1069-1077
© 2004 American Association for Cancer Research

Structure-based design of a selective heparanase inhibitor as an antimetastatic agent

Keisuke Ishida1,2, Go Hirai3, Koji Murakami2, Takayuki Teruya1,4, Siro Simizu1, Mikiko Sodeoka3 and Hiroyuki Osada1,4

1 Antibiotics Laboratory, RIKEN Discovery Research Institute, Saitama, Japan; 2 Hanno Discovery Center, Taiho Pharmaceutical Co., Ltd., Saitama, Japan; 3 Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Miyagi, Japan; and 4 Graduate School of Science and Engineering, Saitama University, Saitama, Japan

Requests for reprints: Hiroyuki Osada, Antibiotics Laboratory, RIKEN Discovery Research Institute, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan. Phone: 81-48-467-9541; Fax: 81-48-462-4669. E-mail: hisyo{at}riken.jp

Heparanase is an endo-ß-D-glucuronidase that degrades heparan sulfate glycosaminoglycans in the extracellular matrix and the basement membrane and is well known to be involved in tumor cell invasion and angiogenesis. We have focused on heparanase as a target for antitumor agents, especially antimetastatic agents. (R)-3-hexadecanoyl-5-hydroxymethyltetronic acid (RK-682) was found to display an inhibitory activity against heparanase in our screening of natural sources. Because RK-682 has been reported to show inhibitory activities against several enzymes, we have tried to develop selective heparanase inhibitors using the method of rational drug design. Based on the structure of the heparanase/RK-682 complex, we speculated that selective inhibitory activity against heparanase could be acquired by arylalkylation, namely, by benzylation of the 4-position of RK-682. Among the rationally designed 4-alkyl-RK-682 derivatives, 4-benzyl-RK-682 has been found to possess a selective inhibitory activity for heparanase (IC50 for heparanase, 17 µmol/L; IC50 for other enzymes, >100 µmol/L). 4-Benzyl-RK-682 also inhibited the invasion and migration of human fibrosarcoma HT1080 cells (IC50 for invasion, 1.5 µmol/L; IC50 for migration, 3.0 µmol/L). On the other hand, RK-682 had no inhibitory effect on the invasion and migration of HT1080 cells at doses of up to 100 µmol/L.


Grant support: Ministry of Education, Science, Sports, Culture and Technology of Japan and the Chemical Biology Project (RIKEN).

The costs of publication of this article were defrayed in part by the payment of page charges. This article must therefore be hereby marked advertisement in accordance with 18 U.S.C. Section 1734 solely to indicate this fact.

Received 12/26/03; revised 5/18/04; accepted 7/ 6/04.




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